CDS
| Accession Number | TCMCG057C26657 |
| gbkey | CDS |
| Protein Id | XP_018492185.1 |
| Location | join(29767774..29767833,29767951..29768038,29768134..29768936,29769029..29769229,29769347..29769457,29769732..29770159,29770238..29770346,29770432..29770512,29770585..29770757,29770895..29771020,29771222..29771383,29771478..29771535,29771805..29772035,29772156..29772302,29772402..29772962,29773062..29773322,29773396..29773503,29773589..29773683,29773770..29773926,29774093..29774302,29774418..29774579,29774774..29774989) |
| Gene | LOC108862525 |
| GeneID | 108862525 |
| Organism | Raphanus sativus |
Protein
| Length | 1515aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018636683.1 |
| Definition | PREDICTED: DNA helicase INO80 isoform X2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | DNA helicase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11665
[VIEW IN KEGG] |
| EC |
3.6.4.12
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGATCCTTCGAGAAGGCAATTGAAGGACTCGCGTTACGCTAATCTCTTCGATCTCGAGCCGTTGATGAACTTCAGGATCCCGAGACATGAAGATGAGACTGATTACTATGGGAGTAGTAGCCAGGATGAAACTAGAGGCAATCAAGTAGCAAACTACGGCAACGGTGTTAAACCGGGGATGAATTCGAGTGCCAAGAAGAGAAAGCGGTGGACAGAGGTTGATGATGATGTAGAGGATGGTGATGATCATAACTACAGTCGACATGTTACCGAGGAGCATTACAGAGCAATGCTTGGGGAGCATGTGCAAAGATTCAAAAGTAGGTCCAGGGAGTCTCGAGGGAATCACGCGCCTCTGTTGGGTGTTCCGGTGCGTAATAAGAGCAATGTGGGCATTAACAGAGGTAGGAACGATCACCACAGGAGATTCTATGACGTGGACACCTCCTCGAATTTTGCTGCTGATGGGATTCCACAAAGGCGTGGAAGCTATCGTGAATCCAATATTACCCCCAAAGTAGCATATGAGCCTTCGTATTTGGATATTGGGGAAGGTGTTGTCTACAAAATCCCTCCGAGTTATGACAAGCTGGTGGCGTCATTAAACTTACCAAGCTTTTCAGATATTCATGTGGACGATTTCTACTTGAAAGGAGCTCTGGATCTGAGATCATTAGCTGAGCTGATGGCTAGGGATAAAAGGTCTGGAGCTAGAAGCCGTAATGGAATGGGTGAGCCTCGACCTCAGTATGATTCACTTCAAGCTAGAGTGAAGGCCTTGTCAGCTTCAAACTCCAGCCCTAACTTCAGCCTCAAGGTGTCAGAAGATGCAATGAACTCTGTCATCCCAGAAGGAGCTGCTGGAACTACTGCACGGACAATACTATCAGAGGGTGGTGTTTTACAGGTCCATTACGTCAAGGTTCTTGAGAAGGGGGATACATATGAGATTGTTCAACGAAGTCTGCCTAAGAAGCTGAAGGTAAAGAATGATCCTGCAGTAATTGAAAAGGCAGAAAGGGACAAGATTCGAAAAGTTTGGATCAACATTGTCAGAAGAGATATACCAAAACACCATAGAGTTTTCACAACGTTTCATCGGAAACAATCAATTGATGCCAAAAGGTTTGCAGATGGTTGCCAACGAGAGGTGAGGATGAAGGTGGCCAGATCATTCAAACTGCCAAGGAGTGCACCAATTCGCACCAGGAAGATATCCAGAGACATGCTGCTATTCTGGAAGCGCTATGACAAGCAGATGGCCGAAGAGAGGAAAAAACAGGAAAAGGAAGCGGCAGAGGCATTAAAACGTGAACAGGAGCTTCGAGAGGCACAAAGGCAGCAACAGAGGCTTAATTTTCTTATTAAACAGACTGAACTTTACAGTCACTTCATGCAAAACAAAACCGATGCAATGCCTTCCGAACCCCTGCCGATAGGAGATGAAAATCTGGCTGACAAAGTAATCCTGGAACCTTCAGCAGCAAAACTTTCTGAGGTGGAGGATCCTGAAGTTGCTAAAATGAAGGAAGATGCCCTGAAGGCTGCTCGAGAGGCAGTGTCAAAGCAGAGAAAAATAACAGATGCATTTGACACTGAATATATGAAGCTACAGCAACCTTCTGACATGGAAGGACCATCAATTGATGTCTCAGTCTCGGGCTCGGGCAATATAGACTTACATAACCCATCTACAATGCCTGTCACATCAACAGTTCAGACTCCAGAAATGTTTAAAGGAACTCTAAAGGAATACCAAATGAAAGGCCTTCAGTGGCTAGTGAATTGTTATGAGCAGGGTTTGAATGGCATTCTTGCGGATGAAATGGGCTTGGGTAAGACTATTCAAGCTATGGCGTTCTTGGCACATTTGGCTGAGGAAAAAAACATTTGGGGTCCATTTCTTGTTGTTGCCCCTGCTTCTGTTCTTAACAATTGGGCTGATGAGATTAGTCGTTTCTGTCCTGACTTGAAAACTCTTCCGTATTGGGGAGGGTTACAAGAACGGACAATTTTACGAAAGAATATCAATCCCAAGCGTATGTACCGAAGGGATGCTGGTTTTCATATTTTAATTACCAGCTATCAGCTATTAGTAACTGATGAAAAGTATTTTCGCCGGGTGAAGTGGCAGTATATGGTACTAGATGAGGCCCAAGCAATCAAAAGTTCCACAAGTATAAGATGGAAGACCCTGCTTAGTTTCAACTGTCGGAACCGATTGCTTCTGACTGGTACTCCAATTCAGAATAACATGGCGGAGTTATGGGCCTTGCTGCACTTCATCATGCCAATGGTGTTTGACAGCCATGAACAATTTAATGAGTGGTTCTCAAAAGGAATCGAGAATCATGCTGAACATGGAGGCACTTTAAACGAGCACCAGCTTAACAGACTGCATGCAATATTAAAGCCATTCATGCTGCGACGTGTCAAAAAGGATGTGGTTTCTGAGCTAACTACAAAGACGGAAGTTACAGTACACTGCAAGCTCAGTTCTCGACAACAAGCTTTCTATCAGGCTATCAAGAACAAAATTTCTCTGGCTGAGTTGTTTGACAGCAACCGTGGGCATTTTAATGAAAAGAAAATATTGAATCTGATGAATATCGTCATTCAACTTAGAAAGGTTTGCAACCATCCAGAGTTGTTCGAAAGGAATGAAGGGAGCTCGTATCTCTACTTTGGAGTGATGTCCAATTCCCTTTTACCCCCTCCCTTTGGTGAGCTAGAGGATGTACACTATTCTGGTGGTCAAAATCCCATAACATACAAGATACCTAAACTCCTAGAGAAAGAAATGCTCCAAAACTCTGAAACGTTTTGCTCTTCTATCGGGAAGGGCTTATCAAGAGAATCCTTTCTGAAGCATTTTAATATATTTTCACCAGAGTATATTCATAGGTCAACACTCCCATCTGATGGTAGCGTAGATCAAGCAGTTAGTGGAAGTGGAGCATTTGGCTTTTCCCGTTTGATGGATTTATCACCATCAGAAGTTGGATATCTGGCTTTGTGCTCCGTCATGGAAAGGCTATTATTCTCTATACTGAAATGGGAGCGGCAATTCTTGGATGAAATAGTAGACTCTTTTATGGAATTCACAGATGATGATCTTAATGGAGATAACATCACAAGAGTTAAAACCAGAGCTGTCACAAGAATGTTGTTGATGCCATCAAAAGTTGAAACGAGTTTGCTGAAAGGGAAAGTCAGCACAGGCCCTACCTGTCACTCATTTGAATCTCTAGTGATCTCTCATCAGGATAGGCTACTTTCAAATATCAAACTCCTACACTCTGCGTATACGTTTATCCCCAAAGCCAGAGCTCCACCGGTAAGCGTTCATTGCTCGGACAGAAACTCTGCATACAGAATTACAGAGGAAATGCACCAACCATGGCTGAAGAGACTATTAATCGGATTTGCACGAACCTCTGAAGCTAATGGGCCAAGGAAGCCGAGCAGCCTTCCACATCCTTTAATCCAAGAAATTGACTCAGAACTTCCAGTTGTGCAACCTGCGCTTCAACTGACGCACAGAATATTTGGTTCTTGCCCTCCAATGCAAAGTTTTGACCCTGCAAAGTTGCTCACGGACTCTGGGAAGCTGCAGACACTTGATATATTATTGAAGCGGCTTAGAGCTGGAAATCACAGGGTGCTCCTCTTTGCACAAATGACAAAGATGCTGAATATTCTCGAGGATTACATGAACTATAGAAAGTACAAGTACCTCAGGCTTGATGGATCCTCCACCATCATGGATCGCCGAGATATGGTTAGGGATTTTCAGCAAAGGAGCGATATTTTTGTGTTCTTGCTGAGCACTAGAGCTGGAGGACTTGGTATCAACTTGACTGCTGCTGACACAGTCATATTCTATGAAAGTGATTGGAATCCCACCTTGGATTTACAAGCTATGGACAGAGCTCATCGTCTTGGTCAAACAAAAGATGTTACTGTTTATCGGCTCATCTGCAAGGAAACAGTGGAAGAGAAAATATTGCACAGAGCCAGTCAGAAAAATACAGTTCAACAGCTTGTAATGACAGGAGGTCATGTACAGGGTGATGATGTTTTTGGAACTGCGGATGTGGTATCGTTGCTTATGGATGATGCAGAGGCAGCACAACTAGAGCAGAAATTCAGAGAACTACCATTACAGGTAAAGGACAGGCAGAAGAAAAAACAGCCAATGAAACGAATCAGAATAGATGCTGAAGGAGATGCAGCTTTGGAAGAGTTGGATGATGCTACCGAACGTCAGGATAATGGGGAGGAACCTGCTGACCAAGAACCGGAAAATACAAAACCTAGTAACAAAAAGAGGAAGGCTGCGTCAACTCCGAGAGCTAGAGTTCCTCAGAAAGCAAAGGAAGACGAGAATGGTGAAGGAGATGATACTCCTCTTCAGCCTCAGAGAACAAAAAGAGTAAAGAGACAAACAAAGAGCATAAACGAGTCTCTTGAACCTGTCTTCTCTGCATCAGTTACTCCAACAAATGGAGATTTCAACCCAAGTACCTCTAATGCAGATGGTTAA |
| Protein: MDPSRRQLKDSRYANLFDLEPLMNFRIPRHEDETDYYGSSSQDETRGNQVANYGNGVKPGMNSSAKKRKRWTEVDDDVEDGDDHNYSRHVTEEHYRAMLGEHVQRFKSRSRESRGNHAPLLGVPVRNKSNVGINRGRNDHHRRFYDVDTSSNFAADGIPQRRGSYRESNITPKVAYEPSYLDIGEGVVYKIPPSYDKLVASLNLPSFSDIHVDDFYLKGALDLRSLAELMARDKRSGARSRNGMGEPRPQYDSLQARVKALSASNSSPNFSLKVSEDAMNSVIPEGAAGTTARTILSEGGVLQVHYVKVLEKGDTYEIVQRSLPKKLKVKNDPAVIEKAERDKIRKVWINIVRRDIPKHHRVFTTFHRKQSIDAKRFADGCQREVRMKVARSFKLPRSAPIRTRKISRDMLLFWKRYDKQMAEERKKQEKEAAEALKREQELREAQRQQQRLNFLIKQTELYSHFMQNKTDAMPSEPLPIGDENLADKVILEPSAAKLSEVEDPEVAKMKEDALKAAREAVSKQRKITDAFDTEYMKLQQPSDMEGPSIDVSVSGSGNIDLHNPSTMPVTSTVQTPEMFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSTSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMVFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHFNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVMSNSLLPPPFGELEDVHYSGGQNPITYKIPKLLEKEMLQNSETFCSSIGKGLSRESFLKHFNIFSPEYIHRSTLPSDGSVDQAVSGSGAFGFSRLMDLSPSEVGYLALCSVMERLLFSILKWERQFLDEIVDSFMEFTDDDLNGDNITRVKTRAVTRMLLMPSKVETSLLKGKVSTGPTCHSFESLVISHQDRLLSNIKLLHSAYTFIPKARAPPVSVHCSDRNSAYRITEEMHQPWLKRLLIGFARTSEANGPRKPSSLPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQQRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDVFGTADVVSLLMDDAEAAQLEQKFRELPLQVKDRQKKKQPMKRIRIDAEGDAALEELDDATERQDNGEEPADQEPENTKPSNKKRKAASTPRARVPQKAKEDENGEGDDTPLQPQRTKRVKRQTKSINESLEPVFSASVTPTNGDFNPSTSNADG |